Hi, I can't solve your problem but I think I know how to turn it off for that component (i think!). In the administration part of your site at the JoomSEF component sections, if you click on
ARTIO JoomSEF Configuration which is the top left button, on the page that opens up down the bottom there is a
Component Configuration section. I think this is where you turn off JoomSEF for individual components including iJoomla.
Do you have iJoomla magazine as your home page? Do you have problems with your site creating a url such as
www.mysite.com/xxx/ ?
Mame du Bois